Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855826.1_cds_XP_016512947.1_25536
CDS Infomation

[gene=LOC107829989] [db_xref=GeneID:107829989] [protein=patatin-like protein 1] [protein_id=XP_016512947.1] [location=join(14460..14606,14824..15005,15153..15339,15586..15747,15857..16159,16262..16437,16591..16657)] [gbkey=CDS]
Sequence

ATGGAAAACGAAGCAGCTGGATCATCTCGAGTTGCAATGCCGCCTCCCAACACAGGGACG
CTGATAACCATTCTGACCATCGATGGGGGAGGAATAAGAGGAATCATTCCGGGGGTTATC
CTTTCATATCTTGAATCACAACTACAGGAGTTGGACGGTAAAGATGCAAGAATCGCGGAT
TATTTTGACTTGATTGCAGGAACAAGCACTGGTGGCCTAGTAACAGCAATGTTAGCTGCA
CCAAACAAAGATAAACGCCCTTTATACGCTGCCAAAGATATTACTCCATTTTATCTTGAG
CACTCCCCCAAAATCTTTCCCCAGATCAGTGGACCATTAGCGGGGATCATAAATCTAACC
AAAGCAATGGGAGGACCTAAATATGACGGGAAATATCTTCACAAACTTATAAAGGGTATC
TTAGGAGGTACCAGGTTGCATGATACATTAACTGCCGTCGTAATTCCAACTTTTGACATC
AAGAAACTTCAGCCAGTTATTTTCAGCTCATATGAGGCAATCTTGAAACCTGATTTGGAT
GCCGAACTGGCGGACATTTGTATTAGTACCTCGGCAGCACCAACTTTTCTACCTGCCTAT
GGTTTCAAGAACAAGGATGCTCAAGATAATGAACGAGAATTCAACCTAATTGATGGTGGT
GTCGCTGCTAATAACCCAACATTGGTCGCAATTGGTGAGGTGACCAAGCAAGTATTGATG
CAGCACGCAGACTTATTCCCTATCAAGCCAATGGATTATGGTCGCTTTCTGGTAATATCA
CTTGGGACAGGCAATGCAAAGAACGAGCACAAATACAATGCCCAAATGGCTGCCAAGTGG
GGATTACTTAGCTGGCTTTTTAATGACAACTCTACACCAATTATAGATGCTTTTAATCAA
GCAAGCGCTGATATGGTTGATTTTCACAACTTTGTGGTTTTCAAAGCTCTTCACTCGGAC
GATAAGTACCTTCGTATCCAGGATGACACCTTGACGGGGAACTTGGCCTCAGTTGACATA
GCCACAAAGGAAAACTTACAAGGCCTCGTCAAGGTTGGAGAACACCTGCTGGAAAAACCA
GTTTCAAAGATTAACTTGGACAAAGGAGTTTATGAAGCAGTTGAAAATGGAGGAACCAAC
AAGGAAGCTCTTCAGAGGTTTGCGAAGATACTGTCGGACGAGAGAAAATTACGCGAGTTC
AATGCCGGTAGCCGGTTGGTCTAA

Peptide Sequence

PEP ID

XP_016512947.1
PEP Infomation

PREDICTED: patatin-like protein 1 [Nicotiana tabacum]
Sequence

MENEAAGSSRVAMPPPNTGTLITILTIDGGGIRGIIPGVILSYLESQLQELDGKDARIAD
YFDLIAGTSTGGLVTAMLAAPNKDKRPLYAAKDITPFYLEHSPKIFPQISGPLAGIINLT
KAMGGPKYDGKYLHKLIKGILGGTRLHDTLTAVVIPTFDIKKLQPVIFSSYEAILKPDLD
AELADICISTSAAPTFLPAYGFKNKDAQDNEREFNLIDGGVAANNPTLVAIGEVTKQVLM
QHADLFPIKPMDYGRFLVISLGTGNAKNEHKYNAQMAAKWGLLSWLFNDNSTPIIDAFNQ
ASADMVDFHNFVVFKALHSDDKYLRIQDDTLTGNLASVDIATKENLQGLVKVGEHLLEKP
VSKINLDKGVYEAVENGGTNKEALQRFAKILSDERKLREFNAGSRLV

Transcript Sequence

Gene sequence data has not been registered.